Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav14n-3A0A075B645 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav14n-3A0A075B645 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav14n-3A0A075B645 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav14n-3A0A075B645 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Gm22238-201ENSMUST00000175222 88 ntBASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav14n-3A0A075B645 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav14n-3A0A075B645 Cap2-205ENSMUST00000225824 1634 ntBASIC13.53□□□□□ -0.24
Trav14n-3A0A075B645 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms