Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13-1A0A075B644 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13-1A0A075B644 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13-1A0A075B644 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Gm2399-201ENSMUST00000104944 225 ntBASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav13-1A0A075B644 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-1A0A075B644 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms