Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8n-2A0A075B633 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8n-2A0A075B633 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gm18101-201ENSMUST00000215769 548 ntBASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav8n-2A0A075B633 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav8n-2A0A075B633 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Gm33142-201ENSMUST00000193913 867 ntBASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Gm4974-201ENSMUST00000209974 875 ntBASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav8n-2A0A075B633 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Gm6345-202ENSMUST00000180900 204 ntBASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav8n-2A0A075B633 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav8n-2A0A075B633 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms