Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav4n-4A0A075B615 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4n-4A0A075B615 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4n-4A0A075B615 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav4n-4A0A075B615 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Tgds-204ENSMUST00000228543 1594 ntBASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4n-4A0A075B615 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4n-4A0A075B615 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav4n-4A0A075B615 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms