Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav9-1A0A075B601 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9-1A0A075B601 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9-1A0A075B601 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Gm7514-201ENSMUST00000209475 934 ntBASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-1A0A075B601 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav9-1A0A075B601 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-1A0A075B601 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Gm10033-202ENSMUST00000211874 928 ntBASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Gm18671-201ENSMUST00000214826 683 ntBASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-1A0A075B601 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Gm42642-201ENSMUST00000200683 355 ntBASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-1A0A075B601 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-1A0A075B601 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-1A0A075B601 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav9-1A0A075B601 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-1A0A075B601 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms