Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm17994-201ENSMUST00000209260 533 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm18255-201ENSMUST00000211316 765 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm10688-201ENSMUST00000214985 520 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm8863-201ENSMUST00000216630 926 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm18247-201ENSMUST00000222937 601 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Trim3Q9R1R2 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm14756-201ENSMUST00000116395 240 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm13690-201ENSMUST00000118989 285 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm16074-201ENSMUST00000119524 444 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm14331-201ENSMUST00000120396 409 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm7931-201ENSMUST00000121537 271 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm15275-201ENSMUST00000154752 347 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm5430-201ENSMUST00000182525 915 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm26923-201ENSMUST00000182615 996 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm8367-201ENSMUST00000186145 887 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm28080-201ENSMUST00000188552 722 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm21524-201ENSMUST00000190499 696 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm21715-201ENSMUST00000191056 694 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm37430-201ENSMUST00000193039 196 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm18467-201ENSMUST00000208805 434 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm38574-201ENSMUST00000211855 640 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim3Q9R1R2 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms