Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm45857-201ENSMUST00000212207 356 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 AC160999.1-201ENSMUST00000225675 810 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 CT030704.1-201ENSMUST00000227521 699 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm5185-201ENSMUST00000080271 619 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ube3bQ9ES34 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ube3bQ9ES34 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.4□□□□□ -1.07
Ube3bQ9ES34 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC8.4□□□□□ -1.07
Ube3bQ9ES34 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ube3bQ9ES34 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm25647-201ENSMUST00000101832 78 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm25823-201ENSMUST00000101995 78 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm16082-201ENSMUST00000115992 377 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm12468-201ENSMUST00000116189 404 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm13006-201ENSMUST00000118683 214 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm16216-201ENSMUST00000118970 1111 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm13745-201ENSMUST00000121994 527 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm23024-201ENSMUST00000158770 292 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm7316-201ENSMUST00000165395 445 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm24220-201ENSMUST00000177753 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm25988-201ENSMUST00000177759 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm23471-201ENSMUST00000177886 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm26488-201ENSMUST00000178225 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm23449-201ENSMUST00000179208 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm25221-201ENSMUST00000180051 79 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Mir7033-201ENSMUST00000184259 81 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm43856-201ENSMUST00000197004 369 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm5660-201ENSMUST00000197453 1149 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm44927-201ENSMUST00000207573 716 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm3678-201ENSMUST00000218888 492 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm25079-201ENSMUST00000082529 203 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Mir181a-1-201ENSMUST00000083631 87 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gm15189-201ENSMUST00000121164 1966 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ube3bQ9ES34 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.38□□□□□ -1.07
Ube3bQ9ES34 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms