Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm27976-201ENSMUST00000183635 162 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm27155-201ENSMUST00000183716 898 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm29605-201ENSMUST00000190800 292 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm38360-201ENSMUST00000195130 454 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm22711-202ENSMUST00000197029 135 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm42926-201ENSMUST00000200496 697 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm44138-201ENSMUST00000204939 271 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm18855-201ENSMUST00000206689 570 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm18600-201ENSMUST00000207205 505 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ddx56Q9D0R4 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm12565-201ENSMUST00000119004 649 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm8312-201ENSMUST00000119380 618 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm14489-201ENSMUST00000120868 901 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm12978-201ENSMUST00000121250 522 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm15502-201ENSMUST00000121449 208 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm15141-201ENSMUST00000121860 729 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm24592-201ENSMUST00000122505 106 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm22604-201ENSMUST00000157604 311 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm25989-201ENSMUST00000158761 133 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm27864-201ENSMUST00000183704 190 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Mir7058-201ENSMUST00000184637 75 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm37477-201ENSMUST00000195215 884 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ddx56Q9D0R4 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms