Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkx6-1Q99MA9 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm11256-201ENSMUST00000118109 829 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm13835-201ENSMUST00000118459 685 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm11420-201ENSMUST00000120047 402 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm15750-201ENSMUST00000120970 616 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm5383-201ENSMUST00000121177 617 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm25979-201ENSMUST00000157177 138 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm16557-201ENSMUST00000159182 191 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm27225-201ENSMUST00000183833 557 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm43232-201ENSMUST00000201346 364 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm42646-201ENSMUST00000202233 914 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm44909-201ENSMUST00000208756 165 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm4052-201ENSMUST00000220890 451 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Nkx6-1Q99MA9 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm15765-201ENSMUST00000118407 910 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm11879-201ENSMUST00000121885 702 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm16373-201ENSMUST00000129517 303 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm23674-201ENSMUST00000157473 131 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm26410-201ENSMUST00000157670 261 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm3076-201ENSMUST00000161613 451 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm3339-201ENSMUST00000163462 475 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm3140-201ENSMUST00000163523 481 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Mir3078-201ENSMUST00000175231 87 ntBASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nkx6-1Q99MA9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms