Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Scrt1Q99M85 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm24789-201ENSMUST00000104282 131 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm12937-201ENSMUST00000118333 448 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm15331-201ENSMUST00000120225 385 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm22420-201ENSMUST00000178795 126 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm16531-201ENSMUST00000180658 967 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm1972-201ENSMUST00000181606 964 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm28017-201ENSMUST00000183434 126 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm38291-201ENSMUST00000193671 259 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm38670-201ENSMUST00000199248 77 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm6070-201ENSMUST00000207275 419 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm8863-201ENSMUST00000216630 926 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm9788-201ENSMUST00000057038 906 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.23□□□□□ -1.57
Scrt1Q99M85 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Scrt1Q99M85 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Scrt1Q99M85 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm12874-201ENSMUST00000117190 913 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm14331-201ENSMUST00000120396 409 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm22596-201ENSMUST00000157601 316 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm6541-201ENSMUST00000165542 561 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm8321-201ENSMUST00000181691 980 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm28975-201ENSMUST00000186412 686 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm28640-201ENSMUST00000190918 550 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm31211-201ENSMUST00000199170 253 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Mir219c-201ENSMUST00000199860 60 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm43929-201ENSMUST00000203025 409 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm45574-201ENSMUST00000210921 331 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.22□□□□□ -1.57
Scrt1Q99M85 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Scrt1Q99M85 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms