Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm16082-201ENSMUST00000115992 377 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm11271-201ENSMUST00000116054 440 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm12131-201ENSMUST00000117479 359 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm5319-201ENSMUST00000118965 873 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm12244-201ENSMUST00000119500 291 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm11420-201ENSMUST00000120047 402 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm21392-201ENSMUST00000182950 972 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm28023-201ENSMUST00000184556 60 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm27825-201ENSMUST00000184586 60 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm28885-201ENSMUST00000185615 563 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm37550-201ENSMUST00000193230 463 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm5694-201ENSMUST00000195648 641 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm44471-201ENSMUST00000197963 100 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm44163-201ENSMUST00000205140 475 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm29920-201ENSMUST00000206876 754 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm7639-201ENSMUST00000212608 484 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm4263-202ENSMUST00000221392 667 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Clp1Q99LI9 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms