Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm15838-201ENSMUST00000161575 180 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm24081-201ENSMUST00000175177 125 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm44184-201ENSMUST00000204290 132 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm45733-201ENSMUST00000212988 437 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm7557-201ENSMUST00000221935 865 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf1Q99LC2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm44209-201ENSMUST00000204556 4153 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Mir1188-201ENSMUST00000116756 120 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm12808-201ENSMUST00000120597 404 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm12396-201ENSMUST00000121600 306 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm11787-201ENSMUST00000121996 1050 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm22867-201ENSMUST00000157499 109 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm25019-201ENSMUST00000179732 110 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm43390-201ENSMUST00000196614 421 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm8039-201ENSMUST00000204758 712 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm45246-201ENSMUST00000210820 367 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 AC164567.4-201ENSMUST00000219708 483 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 AC167222.2-201ENSMUST00000220014 295 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm6562-201ENSMUST00000221903 464 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm6049-201ENSMUST00000222369 458 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm2614-201ENSMUST00000223227 403 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 AC156802.1-201ENSMUST00000223623 579 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 CU062626.1-201ENSMUST00000225248 505 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 AC154527.1-201ENSMUST00000225809 242 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cstf1Q99LC2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm38124-201ENSMUST00000191710 2581 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm37959-201ENSMUST00000191700 2897 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Gm21122-201ENSMUST00000191548 3452 ntBASIC6□□□□□ -1.45
Cstf1Q99LC2 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf1Q99LC2 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.99□□□□□ -1.45
Cstf1Q99LC2 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf1Q99LC2 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf1Q99LC2 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms