Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm23979-201ENSMUST00000104071 128 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm25785-201ENSMUST00000104129 125 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm16073-201ENSMUST00000116032 517 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm13770-201ENSMUST00000117149 305 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm6744-201ENSMUST00000119303 543 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12101-201ENSMUST00000121590 390 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12175-201ENSMUST00000122081 345 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5947-201ENSMUST00000179156 714 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5645-201ENSMUST00000179597 714 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm10136-201ENSMUST00000183196 435 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm28660-201ENSMUST00000186496 253 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm19088-201ENSMUST00000198800 566 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm18290-201ENSMUST00000202900 844 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45082-201ENSMUST00000206082 601 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm8911-201ENSMUST00000213986 652 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm18103-201ENSMUST00000216621 779 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm24036-201ENSMUST00000082868 156 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc28bQ8CEG5 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm25093-201ENSMUST00000103993 132 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm8250-201ENSMUST00000117398 774 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm14659-201ENSMUST00000117667 843 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12189-201ENSMUST00000119779 912 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5871-201ENSMUST00000176461 718 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Mir6908-201ENSMUST00000184056 63 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37659-201ENSMUST00000194574 111 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37196-201ENSMUST00000194762 906 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm44227-201ENSMUST00000203576 241 ntBASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc28bQ8CEG5 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms