Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 CT025535.2-201ENSMUST00000228572 7441 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm14158-201ENSMUST00000118409 308 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm7309-201ENSMUST00000121670 581 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm20480-201ENSMUST00000173953 250 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm13473-201ENSMUST00000119289 367 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Vis1-201ENSMUST00000183957 201 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Gm16415-201ENSMUST00000080097 489 ntBASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Mir6943-201ENSMUST00000185186 66 ntBASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm38697-201ENSMUST00000198061 1746 ntBASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Gm19189-201ENSMUST00000221689 754 ntBASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a6Q8C6K9 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm4989-201ENSMUST00000118711 749 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm12074-201ENSMUST00000120189 219 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm13738-201ENSMUST00000122437 469 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm24860-201ENSMUST00000158457 276 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm26595-201ENSMUST00000181585 484 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm44539-201ENSMUST00000206010 238 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm44833-201ENSMUST00000208368 331 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Gm18127-201ENSMUST00000208479 725 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Mir27a-201ENSMUST00000083510 87 ntBASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a6Q8C6K9 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms