Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm12424-201ENSMUST00000179673 447 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm6074-201ENSMUST00000193340 451 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Stmn1-rs1-201ENSMUST00000214793 462 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm7727-201ENSMUST00000219830 671 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 AC154283.2-201ENSMUST00000228954 614 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 G6pc2-201ENSMUST00000005364 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm7203-201ENSMUST00000210880 1404 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Ltf-201ENSMUST00000035077 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Snora17-201ENSMUST00000104004 132 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm7429-201ENSMUST00000118664 348 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm12806-201ENSMUST00000119384 268 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm12109-201ENSMUST00000121140 697 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm14334-201ENSMUST00000122030 693 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm22553-201ENSMUST00000157797 295 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm17304-201ENSMUST00000167618 69 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm6695-201ENSMUST00000177264 1172 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Pea15b-202ENSMUST00000183185 555 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b1-201ENSMUST00000183812 216 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b4-201ENSMUST00000184171 215 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b2-201ENSMUST00000185073 215 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm19498-201ENSMUST00000191128 331 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm37029-201ENSMUST00000195773 239 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b2-202ENSMUST00000196353 216 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b3-202ENSMUST00000198628 215 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Mir3107-201ENSMUST00000199351 90 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b4-202ENSMUST00000199460 216 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b1-202ENSMUST00000200547 215 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm45730-201ENSMUST00000212560 395 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 CT485607.2-201ENSMUST00000214650 91 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 AC139638.1-201ENSMUST00000218027 364 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm7042-201ENSMUST00000223027 384 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm24610-201ENSMUST00000083270 109 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rnu3b3-201ENSMUST00000093738 216 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm16410-201ENSMUST00000094550 774 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm37470-201ENSMUST00000193378 2798 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm5743-202ENSMUST00000212004 1647 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm36936-201ENSMUST00000194508 2749 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.86□□□□□ -0.99
Trim35Q8C006 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim35Q8C006 Rad18-203ENSMUST00000113180 2136 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms