Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 AC154636.1-201ENSMUST00000223226 126 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 AC113269.1-201ENSMUST00000227185 674 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm19368-201ENSMUST00000221258 4424 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm21122-201ENSMUST00000191548 3452 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp47Q8BY87 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm42541-201ENSMUST00000199871 2249 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp47Q8BY87 Gm38026-201ENSMUST00000193284 3880 ntBASIC8.16□□□□□ -1.1
Usp47Q8BY87 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 AC156031.1-201ENSMUST00000217288 2555 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm13593-201ENSMUST00000121329 692 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm42652-201ENSMUST00000199073 614 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm4032-201ENSMUST00000210886 487 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 AC123832.2-201ENSMUST00000215151 129 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 AC192333.6-201ENSMUST00000224565 725 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 AC114585.1-201ENSMUST00000228080 3680 ntBASIC8.15□□□□□ -1.1
Usp47Q8BY87 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp47Q8BY87 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp47Q8BY87 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Usp47Q8BY87 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp47Q8BY87 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Usp47Q8BY87 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm14220-201ENSMUST00000118114 449 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm7079-201ENSMUST00000119726 171 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm23224-201ENSMUST00000158122 271 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm28507-201ENSMUST00000189737 703 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm37932-201ENSMUST00000192258 1167 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm19002-201ENSMUST00000192649 1012 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Trbv9-201ENSMUST00000194494 290 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm43148-201ENSMUST00000198237 520 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm5110-201ENSMUST00000203122 1063 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm45156-201ENSMUST00000207255 439 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm19168-201ENSMUST00000218804 1091 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Gm44829-201ENSMUST00000208008 3193 ntBASIC8.14□□□□□ -1.11
Usp47Q8BY87 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp47Q8BY87 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm45632-201ENSMUST00000211532 1888 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm28320-201ENSMUST00000187777 2273 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm13533-201ENSMUST00000121104 177 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Ear-ps5-201ENSMUST00000164700 463 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm8581-201ENSMUST00000188636 890 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm43078-201ENSMUST00000197222 168 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC8.13□□□□□ -1.11
Usp47Q8BY87 Gm9278-201ENSMUST00000205508 553 ntBASIC8.13□□□□□ -1.11
Usp47Q8BY87 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms