Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc40Q8BI79 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc40Q8BI79 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc40Q8BI79 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc40Q8BI79 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm13702-201ENSMUST00000118542 825 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm16016-201ENSMUST00000120831 550 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm7832-201ENSMUST00000202613 880 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm18290-201ENSMUST00000202900 844 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ccdc40Q8BI79 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc40Q8BI79 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm2199-201ENSMUST00000119065 874 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm13593-201ENSMUST00000121329 692 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm13669-201ENSMUST00000122366 457 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm23069-201ENSMUST00000158240 311 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm18808-201ENSMUST00000173316 462 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm24081-201ENSMUST00000175177 125 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm10095-201ENSMUST00000222765 483 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 AV026068-237ENSMUST00000226075 572 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.21□□□□□ -1.42
Ccdc40Q8BI79 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm24272-201ENSMUST00000102329 98 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms