Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm12643-201ENSMUST00000116078 374 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm12520-201ENSMUST00000117493 316 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm13508-201ENSMUST00000121639 775 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Snrpert-201ENSMUST00000121967 279 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm14366-201ENSMUST00000121970 730 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm24635-201ENSMUST00000122712 128 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm16362-201ENSMUST00000135189 214 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm22728-201ENSMUST00000158087 129 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm18808-201ENSMUST00000173316 462 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm11392-201ENSMUST00000181419 710 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm28956-201ENSMUST00000189047 427 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm37322-201ENSMUST00000193409 337 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm5050-201ENSMUST00000197164 775 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm21054-201ENSMUST00000203981 380 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm17822-201ENSMUST00000204307 351 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm5001-201ENSMUST00000204361 331 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm33626-201ENSMUST00000206790 828 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm44565-201ENSMUST00000208194 269 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm45474-201ENSMUST00000209471 408 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm2975-201ENSMUST00000209710 820 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm9628-201ENSMUST00000222169 725 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm46379-201ENSMUST00000222551 265 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 CT009733.1-201ENSMUST00000225322 425 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Mir296-201ENSMUST00000083587 79 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdh19Q80TF3 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm12985-201ENSMUST00000118376 183 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm15129-201ENSMUST00000119673 279 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm14531-201ENSMUST00000120845 285 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm16412-201ENSMUST00000121602 273 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm24286-201ENSMUST00000157632 128 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm24228-201ENSMUST00000158829 129 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm10177-202ENSMUST00000161698 207 ntBASIC6.88□□□□□ -1.31
Pcdh19Q80TF3 Gm16134-201ENSMUST00000161714 336 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms