Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm8534-201ENSMUST00000118553 766 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm12754-201ENSMUST00000121908 454 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm15096-201ENSMUST00000121918 878 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm24961-201ENSMUST00000157918 184 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm23891-201ENSMUST00000158114 138 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm8221-201ENSMUST00000178052 564 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Mir7222-201ENSMUST00000183740 75 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm17934-201ENSMUST00000192818 422 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.08□□□□□ -1.6
Rif1Q6PR54 Gm36930-201ENSMUST00000195431 2376 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm9308-201ENSMUST00000119073 448 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm28503-201ENSMUST00000185966 147 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm37770-201ENSMUST00000192855 772 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm17951-201ENSMUST00000198536 496 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm45610-201ENSMUST00000209227 784 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm37420-201ENSMUST00000195332 2912 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm23082-201ENSMUST00000157852 133 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm26570-201ENSMUST00000180672 342 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm44474-201ENSMUST00000196525 127 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm5735-201ENSMUST00000207053 167 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm6068-201ENSMUST00000222270 387 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rif1Q6PR54 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm45174-201ENSMUST00000208884 3065 ntBASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rif1Q6PR54 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rif1Q6PR54 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rif1Q6PR54 AC154828.1-201ENSMUST00000220696 2810 ntBASIC5.06□□□□□ -1.6
Rif1Q6PR54 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rif1Q6PR54 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rif1Q6PR54 Gm14998-201ENSMUST00000120502 495 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms