Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm43345-201ENSMUST00000199484 269 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm21041-201ENSMUST00000214829 823 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 CT009713.9-201ENSMUST00000223604 389 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm25005-201ENSMUST00000083812 156 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm42728-201ENSMUST00000202644 1552 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 AC164883.2-201ENSMUST00000227931 3815 ntBASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim41Q5NCC3 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm43612-201ENSMUST00000196087 3207 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 AC158986.1-201ENSMUST00000228391 3455 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm14991-201ENSMUST00000119913 598 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm15967-201ENSMUST00000120027 1116 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Adgrg4-206ENSMUST00000168724 531 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm9285-201ENSMUST00000177691 697 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Mir6341-201ENSMUST00000183490 121 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm37098-201ENSMUST00000192290 244 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm44943-201ENSMUST00000207254 300 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm6575-201ENSMUST00000222946 697 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 AC154328.1-201ENSMUST00000225875 307 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 AC154626.1-201ENSMUST00000226070 311 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm16020-201ENSMUST00000084281 210 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Olfr878-201ENSMUST00000086061 1065 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 BC055308-201ENSMUST00000193380 2538 ntBASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim41Q5NCC3 AC107453.1-201ENSMUST00000227490 3268 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm13821-201ENSMUST00000202029 3201 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm23979-201ENSMUST00000104071 128 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm22072-201ENSMUST00000116850 121 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm14729-201ENSMUST00000118373 689 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm8757-201ENSMUST00000119660 372 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm12873-201ENSMUST00000119988 422 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm5166-201ENSMUST00000121332 573 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm25387-201ENSMUST00000157813 132 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm22312-201ENSMUST00000158005 130 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Mir3097-201ENSMUST00000175356 67 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 n-R5s109-201ENSMUST00000179195 119 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Mir6398-201ENSMUST00000184541 102 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm29550-201ENSMUST00000185543 285 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms