Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm22499-201ENSMUST00000104501 135 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm13114-201ENSMUST00000117605 106 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm7189-201ENSMUST00000119811 429 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm25782-201ENSMUST00000122526 289 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm24179-201ENSMUST00000158925 127 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm16164-201ENSMUST00000160078 468 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm27460-201ENSMUST00000184213 100 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm37581-201ENSMUST00000192371 988 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm43222-201ENSMUST00000199013 603 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm2040-201ENSMUST00000202979 289 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm18205-201ENSMUST00000209215 841 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm10688-201ENSMUST00000214985 520 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm18405-201ENSMUST00000220743 511 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 AV026068-216ENSMUST00000223874 328 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.81□□□□□ -1.48
Trafd1Q3UDK1 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm12077-201ENSMUST00000117049 364 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm14115-201ENSMUST00000119242 482 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm4853-201ENSMUST00000119359 394 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm13531-201ENSMUST00000121893 543 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Mir5110-201ENSMUST00000175537 87 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm20778-201ENSMUST00000178524 627 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Mir6361-201ENSMUST00000185079 101 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm28196-201ENSMUST00000187719 640 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm35013-201ENSMUST00000197218 832 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm44312-201ENSMUST00000203536 469 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm44239-201ENSMUST00000204228 271 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm18467-201ENSMUST00000208805 434 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm22126-201ENSMUST00000083244 142 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.8□□□□□ -1.48
Trafd1Q3UDK1 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm15048-201ENSMUST00000118201 954 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms