Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm4874-201ENSMUST00000203589 691 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 AC125543.1-201ENSMUST00000222778 101 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 AC154636.1-201ENSMUST00000223226 126 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm4963-201ENSMUST00000072718 378 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col17a1Q07563 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm8401-201ENSMUST00000120248 1739 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Gm45548-201ENSMUST00000210076 3167 ntBASIC9.16□□□□□ -0.94
Col17a1Q07563 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm22493-201ENSMUST00000104494 132 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm26474-201ENSMUST00000116762 122 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm9440-201ENSMUST00000119667 539 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm13213-201ENSMUST00000119668 474 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm15803-201ENSMUST00000120118 394 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm14301-201ENSMUST00000120181 324 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm44108-201ENSMUST00000203525 422 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.94
Col17a1Q07563 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm18591-201ENSMUST00000220568 763 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm42729-201ENSMUST00000201770 2930 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 CT009480.2-201ENSMUST00000225152 3369 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm10855-201ENSMUST00000100426 2541 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Gm44178-201ENSMUST00000205229 2930 ntBASIC9.15□□□□□ -0.94
Col17a1Q07563 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.15□□□□□ -0.94
Col17a1Q07563 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Col17a1Q07563 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Col17a1Q07563 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Col17a1Q07563 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Col17a1Q07563 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm13149-201ENSMUST00000122071 339 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm25293-201ENSMUST00000122792 285 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm22916-201ENSMUST00000157616 119 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm16589-201ENSMUST00000159522 918 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm25748-201ENSMUST00000175487 70 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm8367-201ENSMUST00000186145 887 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm46327-201ENSMUST00000218240 365 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm5080-201ENSMUST00000220341 743 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 AC154840.1-201ENSMUST00000225216 408 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 AC132317.2-201ENSMUST00000227301 519 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 AC074315.1-201ENSMUST00000228801 214 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm22053-201ENSMUST00000083394 200 ntBASIC9.15□□□□□ -0.95
Col17a1Q07563 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col17a1Q07563 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col17a1Q07563 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm22899-201ENSMUST00000104540 131 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm11447-201ENSMUST00000118983 858 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm12237-201ENSMUST00000120158 470 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm15152-201ENSMUST00000121540 394 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm8454-201ENSMUST00000196980 811 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 Glud-ps-201ENSMUST00000206310 657 ntBASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Col17a1Q07563 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col17a1Q07563 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Col17a1Q07563 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms