Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11925-201ENSMUST00000121375 535 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm14349-201ENSMUST00000137155 902 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm23669-201ENSMUST00000157470 128 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm26372-201ENSMUST00000157831 236 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm15970-201ENSMUST00000160623 834 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Vis1-201ENSMUST00000183957 201 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm29159-201ENSMUST00000187969 379 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Nkx3-1P97436 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm19231-201ENSMUST00000193212 830 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm37838-201ENSMUST00000194464 312 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm44494-201ENSMUST00000196760 129 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm42961-201ENSMUST00000202023 181 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm44712-201ENSMUST00000206250 1076 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm9202-201ENSMUST00000223036 437 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm9293-201ENSMUST00000223096 306 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm6776-201ENSMUST00000057752 900 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm23737-201ENSMUST00000082547 159 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm10540-201ENSMUST00000097581 276 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm11737-201ENSMUST00000118713 468 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm12303-201ENSMUST00000119506 673 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm22492-201ENSMUST00000157192 297 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28943-201ENSMUST00000186187 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28736-201ENSMUST00000186257 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29401-201ENSMUST00000186690 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29178-204ENSMUST00000186784 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28589-201ENSMUST00000186991 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28936-201ENSMUST00000187153 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29121-201ENSMUST00000187611 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28243-201ENSMUST00000187801 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28844-202ENSMUST00000187977 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28973-201ENSMUST00000189310 613 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29058-201ENSMUST00000189510 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29624-201ENSMUST00000190018 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28780-201ENSMUST00000190223 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28969-211ENSMUST00000190992 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm28990-207ENSMUST00000191219 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm18444-201ENSMUST00000191239 629 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm36468-201ENSMUST00000192119 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm31572-201ENSMUST00000193341 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm30175-201ENSMUST00000194173 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm37774-201ENSMUST00000194401 245 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm30858-201ENSMUST00000195516 615 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm43222-201ENSMUST00000199013 603 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm18601-201ENSMUST00000220831 634 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm36501-201ENSMUST00000221857 745 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm24200-201ENSMUST00000082955 157 ntBASIC5.14□□□□□ -1.59
Nkx3-1P97436 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.14□□□□□ -1.59
Nkx3-1P97436 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms