Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.48□□□□□ -1.21
Msh6P54276 AC144733.2-201ENSMUST00000222552 2292 ntBASIC7.48□□□□□ -1.21
Msh6P54276 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.48□□□□□ -1.21
Msh6P54276 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Msh6P54276 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.48□□□□□ -1.21
Msh6P54276 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.48□□□□□ -1.21
Msh6P54276 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.48□□□□□ -1.21
Msh6P54276 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.48□□□□□ -1.21
Msh6P54276 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.48□□□□□ -1.21
Msh6P54276 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.48□□□□□ -1.21
Msh6P54276 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Msh6P54276 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC7.47□□□□□ -1.21
Msh6P54276 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Msh6P54276 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Msh6P54276 Ear-ps2-201ENSMUST00000100689 466 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm14871-201ENSMUST00000119056 194 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm13473-201ENSMUST00000119289 367 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm12808-201ENSMUST00000120597 404 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Msh6P54276 Gm42437-201ENSMUST00000197263 923 ntBASIC7.47□□□□□ -1.21
Msh6P54276 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC7.47□□□□□ -1.21
Msh6P54276 Mir133b-201ENSMUST00000083546 119 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Msh6P54276 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.47□□□□□ -1.21
Msh6P54276 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Msh6P54276 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 AC122357.3-201ENSMUST00000221260 2293 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.47□□□□□ -1.21
Msh6P54276 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Msh6P54276 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Msh6P54276 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Gm4234-201ENSMUST00000119747 714 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC7.46□□□□□ -1.21
Msh6P54276 Gm8185-201ENSMUST00000160999 669 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Gm43743-202ENSMUST00000198353 491 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Gm18007-201ENSMUST00000205019 844 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.46□□□□□ -1.21
Msh6P54276 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC7.46□□□□□ -1.21
Msh6P54276 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 CT025579.3-201ENSMUST00000224543 451 ntBASIC7.46□□□□□ -1.21
Msh6P54276 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.46□□□□□ -1.21
Msh6P54276 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Msh6P54276 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Msh6P54276 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Msh6P54276 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Msh6P54276 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Msh6P54276 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Msh6P54276 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Msh6P54276 Gm37531-201ENSMUST00000191628 5415 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Msh6P54276 Gm8595-201ENSMUST00000118250 630 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm13333-201ENSMUST00000119424 781 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm6305-201ENSMUST00000121027 1012 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm15877-201ENSMUST00000121897 964 ntBASIC7.46□□□□□ -1.22
Msh6P54276 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.46□□□□□ -1.22
Msh6P54276 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.46□□□□□ -1.22
Msh6P54276 Gm37341-201ENSMUST00000194680 371 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms