Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm5512-201ENSMUST00000218013 1353 ntBASIC7.05□□□□□ -1.28
Sox1P53783 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.05□□□□□ -1.28
Sox1P53783 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.05□□□□□ -1.28
Sox1P53783 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox1P53783 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sox1P53783 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 AC134917.1-201ENSMUST00000220517 1449 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox1P53783 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm14529-201ENSMUST00000117894 406 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm13878-201ENSMUST00000117986 577 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm25459-201ENSMUST00000157953 114 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm16164-201ENSMUST00000160078 468 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm3339-201ENSMUST00000163462 475 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Mir3572-201ENSMUST00000175549 86 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm27317-201ENSMUST00000183533 95 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm18406-201ENSMUST00000185872 669 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm37404-201ENSMUST00000195726 359 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm43238-201ENSMUST00000196463 359 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm42818-201ENSMUST00000198869 987 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm33601-201ENSMUST00000210001 961 ntBASIC7.04□□□□□ -1.28
Sox1P53783 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox1P53783 Mir337-201ENSMUST00000083592 97 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox1P53783 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox1P53783 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.04□□□□□ -1.28
Sox1P53783 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.04□□□□□ -1.28
Sox1P53783 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox1P53783 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox1P53783 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.03□□□□□ -1.28
Sox1P53783 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.03□□□□□ -1.28
Sox1P53783 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Sox1P53783 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sox1P53783 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms