Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.86□□□□□ -1.15
Rfx1P48377 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Rfx1P48377 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Rfx1P48377 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Rfx1P48377 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm13265-201ENSMUST00000118090 421 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm12242-201ENSMUST00000118824 738 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm15854-201ENSMUST00000118879 808 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm15659-201ENSMUST00000118881 341 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm13207-201ENSMUST00000119862 773 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm13462-201ENSMUST00000121472 961 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm15388-201ENSMUST00000121578 726 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm6067-201ENSMUST00000121648 491 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm18417-201ENSMUST00000176564 648 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm18848-201ENSMUST00000182069 792 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Pea15b-201ENSMUST00000182806 387 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm8669-201ENSMUST00000183839 945 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm43689-201ENSMUST00000195951 427 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm8539-201ENSMUST00000199822 501 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Diaph3-204ENSMUST00000226254 682 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rfx1P48377 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.85□□□□□ -1.15
Rfx1P48377 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm23975-201ENSMUST00000082685 106 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Gm24207-201ENSMUST00000082781 108 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Rfx1P48377 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Rfx1P48377 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.85□□□□□ -1.15
Rfx1P48377 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Rfx1P48377 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Rfx1P48377 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm42534-201ENSMUST00000196063 1754 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 AC122357.2-201ENSMUST00000220732 1525 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Rfx1P48377 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm24590-201ENSMUST00000116699 119 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm14600-201ENSMUST00000121032 630 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm12639-201ENSMUST00000121400 493 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm14848-201ENSMUST00000121850 467 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm24211-201ENSMUST00000158264 107 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm23022-201ENSMUST00000158768 180 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm27522-201ENSMUST00000183949 230 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Mir7058-201ENSMUST00000184637 75 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Rfx1P48377 Gm38373-201ENSMUST00000192042 288 ntBASIC7.84□□□□□ -1.15
Rfx1P48377 Gm43157-201ENSMUST00000198223 412 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms