Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lire1P11260 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lire1P11260 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.96□□□□□ -1.46
Lire1P11260 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Lire1P11260 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lire1P11260 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Mir708-201ENSMUST00000102189 109 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm24790-201ENSMUST00000104285 132 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm14115-201ENSMUST00000119242 482 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm14614-201ENSMUST00000119873 384 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm2986-201ENSMUST00000121603 382 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm25722-201ENSMUST00000157498 279 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm23386-201ENSMUST00000158585 144 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm23179-201ENSMUST00000158693 304 ntBASIC5.95□□□□□ -1.46
Lire1P11260 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm25675-201ENSMUST00000174979 118 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm22701-201ENSMUST00000175371 291 ntBASIC5.95□□□□□ -1.46
Lire1P11260 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm26509-201ENSMUST00000180947 948 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm27507-201ENSMUST00000184199 93 ntBASIC5.95□□□□□ -1.46
Lire1P11260 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Lire1P11260 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm3841-201ENSMUST00000191399 451 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm29784-201ENSMUST00000196217 406 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm43576-201ENSMUST00000197937 871 ntBASIC5.95□□□□□ -1.46
Lire1P11260 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm2602-201ENSMUST00000202112 571 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Lire1P11260 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm20946-201ENSMUST00000212367 461 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Gm46203-201ENSMUST00000218130 478 ntBASIC5.95□□□□□ -1.46
Lire1P11260 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.95□□□□□ -1.46
Lire1P11260 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lire1P11260 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Lire1P11260 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.95□□□□□ -1.46
Lire1P11260 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lire1P11260 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.95□□□□□ -1.46
Lire1P11260 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lire1P11260 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm23311-201ENSMUST00000104152 134 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm9506-201ENSMUST00000118516 320 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm6461-201ENSMUST00000120015 633 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm13808-201ENSMUST00000121353 184 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm13462-201ENSMUST00000121472 961 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm12807-201ENSMUST00000121546 962 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm12101-201ENSMUST00000121590 390 ntBASIC5.94□□□□□ -1.46
Lire1P11260 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm22084-201ENSMUST00000157585 105 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm23031-201ENSMUST00000157998 119 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm24343-201ENSMUST00000158708 111 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms