Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm15490-201ENSMUST00000119894 387 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm14515-201ENSMUST00000121327 216 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Mir6539-201ENSMUST00000183732 110 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Zfp429-203ENSMUST00000224684 524 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.03□□□□□ -1.44
Col4a6B1AVK5 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col4a6B1AVK5 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm17981-201ENSMUST00000191109 739 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm6070-201ENSMUST00000207275 419 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm5457-201ENSMUST00000022260 333 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm23459-201ENSMUST00000083259 131 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm23795-201ENSMUST00000084006 137 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.02□□□□□ -1.45
Col4a6B1AVK5 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm25655-201ENSMUST00000158465 290 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm45525-201ENSMUST00000210800 389 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Gm31931-201ENSMUST00000219666 222 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Mir342-201ENSMUST00000083502 99 ntBASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col4a6B1AVK5 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms