Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Scn3aA2ASI5 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Scn3aA2ASI5 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Scn3aA2ASI5 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Scn3aA2ASI5 Gm22499-201ENSMUST00000104501 135 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm12303-201ENSMUST00000119506 673 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm22895-201ENSMUST00000157508 308 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm29736-201ENSMUST00000198189 385 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm44108-201ENSMUST00000203525 422 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm26069-201ENSMUST00000157497 277 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm24940-201ENSMUST00000158326 108 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm17511-201ENSMUST00000172206 342 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm29454-201ENSMUST00000190805 393 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm10709-201ENSMUST00000213318 480 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AV026068-231ENSMUST00000225862 482 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Scn3aA2ASI5 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm13593-201ENSMUST00000121329 692 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm20397-201ENSMUST00000174520 362 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm37681-201ENSMUST00000193880 727 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Clec2j-202ENSMUST00000203658 606 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm3257-201ENSMUST00000207217 675 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm18850-201ENSMUST00000211578 388 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.43□□□□□ -1.38
Scn3aA2ASI5 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms