Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ube3bQ9ES34 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm26996-201ENSMUST00000204418 1359 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm14893-201ENSMUST00000117904 282 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm15988-201ENSMUST00000118677 367 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm14530-201ENSMUST00000122391 333 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm25979-201ENSMUST00000157177 138 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm25434-201ENSMUST00000158278 167 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm24741-201ENSMUST00000158857 106 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Adgrg4-206ENSMUST00000168724 531 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm29460-201ENSMUST00000188607 714 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm28413-201ENSMUST00000189369 291 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm9985-201ENSMUST00000044101 510 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ube3bQ9ES34 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm14865-201ENSMUST00000117523 494 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm20773-201ENSMUST00000178940 681 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm27156-201ENSMUST00000184589 754 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm17777-201ENSMUST00000189740 1276 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC8.4□□□□□ -1.06
Ube3bQ9ES34 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms