Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm7146-201ENSMUST00000116079 739 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm13428-201ENSMUST00000117540 365 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm14529-201ENSMUST00000117894 406 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm12813-201ENSMUST00000119615 902 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm5401-201ENSMUST00000122444 365 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm22599-201ENSMUST00000157597 132 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm19560-201ENSMUST00000177510 514 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm27193-201ENSMUST00000184217 586 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm37770-201ENSMUST00000192855 772 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm6631-201ENSMUST00000193699 559 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm43945-201ENSMUST00000203595 754 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm17994-201ENSMUST00000209260 533 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm45850-201ENSMUST00000212536 338 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Snora44-201ENSMUST00000082670 129 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Smc1aQ9CU62 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Mir700-201ENSMUST00000102169 79 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm22714-201ENSMUST00000116894 78 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm15901-201ENSMUST00000117663 941 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm22636-201ENSMUST00000158142 275 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm17511-201ENSMUST00000172206 342 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm45473-201ENSMUST00000211452 616 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.67□□□□□ -1.34
Smc1aQ9CU62 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm15332-201ENSMUST00000118386 357 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm12115-201ENSMUST00000119969 447 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm24065-201ENSMUST00000157487 264 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Mir6952-201ENSMUST00000185092 61 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm7626-201ENSMUST00000195801 353 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Mir6906-201ENSMUST00000198998 58 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms