Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm24157-201ENSMUST00000175265 111 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm22420-201ENSMUST00000178795 126 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm28455-201ENSMUST00000189105 1290 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm37030-201ENSMUST00000194254 295 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm29759-201ENSMUST00000205860 327 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm44896-201ENSMUST00000206190 772 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm45042-201ENSMUST00000207377 211 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm45626-201ENSMUST00000210093 361 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm33178-201ENSMUST00000212090 257 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 AC154734.1-201ENSMUST00000219957 2141 ntBASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpl39lQ9CQD0 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm29112-201ENSMUST00000188962 3487 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm43842-201ENSMUST00000202890 2982 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm37930-201ENSMUST00000194308 1886 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm7058-201ENSMUST00000119209 902 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm5793-201ENSMUST00000119393 630 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm11879-201ENSMUST00000121885 702 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm13531-201ENSMUST00000121893 543 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm12499-201ENSMUST00000121961 546 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm25374-201ENSMUST00000158158 101 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm6872-201ENSMUST00000165001 700 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Mir5617-201ENSMUST00000176786 57 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm9556-201ENSMUST00000182938 940 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm27004-201ENSMUST00000183300 727 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm28006-201ENSMUST00000183841 122 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm37659-201ENSMUST00000194574 111 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm31306-201ENSMUST00000197517 508 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm19088-201ENSMUST00000198800 566 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm43850-201ENSMUST00000202021 578 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm7554-201ENSMUST00000202282 574 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 AC165349.1-201ENSMUST00000217896 424 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm9088-201ENSMUST00000220237 508 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 AC126685.1-201ENSMUST00000221001 121 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 AC133598.2-201ENSMUST00000224302 624 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 AV026068-237ENSMUST00000226075 572 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 CT009539.1-201ENSMUST00000226465 220 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 AC154323.2-201ENSMUST00000226557 1151 ntBASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpl39lQ9CQD0 Gm42662-201ENSMUST00000202539 1431 ntBASIC3.59□□□□□ -1.84
Rpl39lQ9CQD0 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Rpl39lQ9CQD0 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Rpl39lQ9CQD0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms