Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rpa3Q9CQ71 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Rpa3Q9CQ71 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.16□□□□□ -1.42
Rpa3Q9CQ71 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rpa3Q9CQ71 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm43779-201ENSMUST00000196691 829 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm42886-201ENSMUST00000199214 466 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm42961-201ENSMUST00000202023 181 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm45628-201ENSMUST00000210849 274 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm5612-201ENSMUST00000053326 375 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Gm23737-201ENSMUST00000082547 159 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Olfr467-201ENSMUST00000084756 927 ntBASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rpa3Q9CQ71 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Rpa3Q9CQ71 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Rpa3Q9CQ71 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Rpa3Q9CQ71 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm12099-201ENSMUST00000118660 750 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm15335-201ENSMUST00000122442 411 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm24435-201ENSMUST00000157886 110 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm9597-201ENSMUST00000171913 602 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm3715-201ENSMUST00000172308 617 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm22932-201ENSMUST00000175510 72 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm10410-201ENSMUST00000180138 384 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm26898-201ENSMUST00000181678 384 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Mir7082-201ENSMUST00000183526 92 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm27653-201ENSMUST00000185037 136 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.14□□□□□ -1.43
Rpa3Q9CQ71 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm14772-201ENSMUST00000116562 514 ntBASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm14805-201ENSMUST00000120172 340 ntBASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm23149-201ENSMUST00000158837 230 ntBASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.13□□□□□ -1.43
Rpa3Q9CQ71 Mir6244-201ENSMUST00000184156 117 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms