Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim11Q99PQ2 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm11198-201ENSMUST00000119771 974 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm11796-201ENSMUST00000120208 972 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm12044-201ENSMUST00000120335 213 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm14070-201ENSMUST00000120773 428 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm11726-201ENSMUST00000121028 424 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm22025-201ENSMUST00000122734 302 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Mir5101-201ENSMUST00000175181 83 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm38181-201ENSMUST00000181357 720 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm26959-201ENSMUST00000182376 978 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm21877-201ENSMUST00000185640 694 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm17895-201ENSMUST00000194028 874 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm38109-201ENSMUST00000195386 181 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm45042-201ENSMUST00000207377 211 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm19056-201ENSMUST00000218220 797 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 AC121137.1-201ENSMUST00000225272 602 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 AC121114.1-201ENSMUST00000228522 570 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm22043-201ENSMUST00000082993 158 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 n-R5s156-201ENSMUST00000083377 105 ntBASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim11Q99PQ2 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim11Q99PQ2 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim11Q99PQ2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim11Q99PQ2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim11Q99PQ2 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim11Q99PQ2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm14404-201ENSMUST00000119117 1660 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm26079-201ENSMUST00000104066 133 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm13728-201ENSMUST00000117471 400 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm13771-201ENSMUST00000117988 238 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm11972-201ENSMUST00000118514 389 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm7571-201ENSMUST00000120252 927 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Mir1981-201ENSMUST00000157934 82 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm22523-201ENSMUST00000158696 100 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm24176-201ENSMUST00000158928 121 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Gm16138-201ENSMUST00000159341 821 ntBASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim11Q99PQ2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms