Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm16254-201ENSMUST00000131528 730 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm22501-201ENSMUST00000158981 127 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm17915-201ENSMUST00000222077 548 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm24544-201ENSMUST00000103862 110 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm27387-201ENSMUST00000184583 116 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm4963-201ENSMUST00000072718 378 ntBASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh23Q99PF4 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm24265-201ENSMUST00000101833 141 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm7312-201ENSMUST00000118798 469 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm14037-201ENSMUST00000120576 313 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm15796-201ENSMUST00000162135 204 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm22122-201ENSMUST00000175147 200 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm24407-201ENSMUST00000177864 141 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm2429-201ENSMUST00000194635 586 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm8221-201ENSMUST00000178052 564 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm36986-201ENSMUST00000195320 353 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Gm18632-201ENSMUST00000222597 2087 ntBASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh23Q99PF4 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm19029-201ENSMUST00000189923 564 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms