Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24069-201ENSMUST00000104512 127 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm4911-201ENSMUST00000119388 945 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm14925-201ENSMUST00000120611 438 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm12880-201ENSMUST00000120652 494 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm2986-201ENSMUST00000121603 382 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm6395-201ENSMUST00000167639 691 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm18604-201ENSMUST00000172535 558 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm26365-201ENSMUST00000179177 94 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm9457-201ENSMUST00000180176 372 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm27018-201ENSMUST00000181136 225 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm11392-201ENSMUST00000181419 710 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Mir6411-201ENSMUST00000183556 108 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm28997-201ENSMUST00000188759 429 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm8058-201ENSMUST00000217247 587 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC124569.1-201ENSMUST00000225932 101 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm26176-201ENSMUST00000083795 105 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 AC169985.1-201ENSMUST00000223648 2439 ntBASIC7.38□□□□□ -1.23
Clp1Q99LI9 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Clp1Q99LI9 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm24473-201ENSMUST00000104483 131 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm12230-201ENSMUST00000118301 454 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm14162-201ENSMUST00000121985 601 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm4997-201ENSMUST00000154056 360 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm27266-201ENSMUST00000184521 123 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm29950-201ENSMUST00000195273 237 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Clp1Q99LI9 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.37□□□□□ -1.23
Clp1Q99LI9 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Clp1Q99LI9 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms