Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm23440-201ENSMUST00000104299 130 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm6744-201ENSMUST00000119303 543 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm18865-201ENSMUST00000193011 1171 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm43222-201ENSMUST00000199013 603 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Api5-ps-201ENSMUST00000206607 577 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 AV026068-216ENSMUST00000223874 328 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 AV026068-218ENSMUST00000223980 575 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 AC117949.2-201ENSMUST00000225900 584 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm22684-201ENSMUST00000082849 132 ntBASIC7.21□□□□□ -1.26
Brf1Q8CFK2 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brf1Q8CFK2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm14836-201ENSMUST00000118567 471 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm15971-201ENSMUST00000119372 211 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm11990-201ENSMUST00000121505 897 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm12618-201ENSMUST00000121754 483 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm6081-201ENSMUST00000134472 489 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm23229-201ENSMUST00000157297 105 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm17121-201ENSMUST00000170414 847 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm17222-201ENSMUST00000180135 847 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm21399-201ENSMUST00000180210 597 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mir6362-201ENSMUST00000184329 107 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mir6989-201ENSMUST00000184812 65 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 CT030194.2-201ENSMUST00000225752 379 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Brf1Q8CFK2 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms