Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24741-201ENSMUST00000158857 106 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm8032-201ENSMUST00000171009 574 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm31306-201ENSMUST00000197517 508 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5990-201ENSMUST00000203126 746 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm45724-201ENSMUST00000213031 420 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5055-201ENSMUST00000215697 581 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Ccdc28aQ8CEI3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm11624-201ENSMUST00000118579 1041 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm14489-201ENSMUST00000120868 901 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm13899-201ENSMUST00000121519 1255 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Vis1-201ENSMUST00000183957 201 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5260-201ENSMUST00000186157 949 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm4856-201ENSMUST00000192696 1091 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm19182-201ENSMUST00000207139 577 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm44809-201ENSMUST00000208305 993 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm45722-201ENSMUST00000213075 466 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC151904.3-201ENSMUST00000219266 895 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC166105.1-201ENSMUST00000227512 482 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AC135292.2-201ENSMUST00000227559 367 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm24032-201ENSMUST00000083932 159 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm10540-201ENSMUST00000097581 276 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm37833-201ENSMUST00000194342 3256 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm42930-201ENSMUST00000200872 3260 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm37101-201ENSMUST00000191656 3660 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 AW046200-203ENSMUST00000211787 2479 ntBASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Ccdc28aQ8CEI3 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm25593-201ENSMUST00000102272 96 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5405-201ENSMUST00000120478 609 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm15877-201ENSMUST00000121897 964 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm26106-201ENSMUST00000157254 228 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms