Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Gm3266-201ENSMUST00000217832 591 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lrif1Q8CDD9 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Snora35-201ENSMUST00000104579 128 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm13835-201ENSMUST00000118459 685 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm16016-201ENSMUST00000120831 550 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm12618-201ENSMUST00000121754 483 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm15300-201ENSMUST00000122324 279 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm24435-201ENSMUST00000157886 110 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm26970-201ENSMUST00000182990 964 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm7570-201ENSMUST00000215246 698 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm6104-201ENSMUST00000078030 603 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Lrif1Q8CDD9 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lrif1Q8CDD9 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.77□□□□□ -1.49
Lrif1Q8CDD9 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Lrif1Q8CDD9 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.77□□□□□ -1.49
Lrif1Q8CDD9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms