Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Vps53Q8CCB4 Gm38096-201ENSMUST00000193692 2389 ntBASIC7.09□□□□□ -1.28
Vps53Q8CCB4 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Vps53Q8CCB4 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm12643-201ENSMUST00000116078 374 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm8317-201ENSMUST00000121261 471 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm15959-201ENSMUST00000121724 368 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm5947-201ENSMUST00000179156 714 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm5645-201ENSMUST00000179597 714 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm8009-201ENSMUST00000191672 436 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm36994-201ENSMUST00000192941 492 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm37614-201ENSMUST00000195645 210 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm19269-201ENSMUST00000211401 804 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm4510-201ENSMUST00000218265 427 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Vps53Q8CCB4 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm38126-201ENSMUST00000195297 4003 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm25415-201ENSMUST00000104220 132 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm12442-201ENSMUST00000118372 338 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm24179-201ENSMUST00000158925 127 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm21524-201ENSMUST00000190499 696 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm21715-201ENSMUST00000191056 694 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm8869-201ENSMUST00000195222 947 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm43561-201ENSMUST00000199866 448 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm6070-201ENSMUST00000207275 419 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm19033-201ENSMUST00000208516 964 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm3213-201ENSMUST00000219296 441 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Snora44-201ENSMUST00000082670 129 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.07□□□□□ -1.28
Vps53Q8CCB4 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Vps53Q8CCB4 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms