Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Nup98Q6PFD9 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm22499-201ENSMUST00000104501 135 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm14998-201ENSMUST00000120502 495 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm11894-201ENSMUST00000121579 328 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm23872-201ENSMUST00000175432 77 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm2429-201ENSMUST00000194635 586 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm45777-201ENSMUST00000213009 301 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm9386-201ENSMUST00000095195 381 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm22194-201ENSMUST00000116869 95 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm5405-201ENSMUST00000120478 609 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm26595-201ENSMUST00000181585 484 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm27148-201ENSMUST00000185086 160 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm29474-201ENSMUST00000187688 379 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm28188-201ENSMUST00000190483 236 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm8290-201ENSMUST00000218202 477 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Gm6104-201ENSMUST00000078030 603 ntBASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Nup98Q6PFD9 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm13681-201ENSMUST00000117925 210 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm26489-201ENSMUST00000157880 264 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms