Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm38574-201ENSMUST00000211855 640 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 Gm45789-201ENSMUST00000213038 364 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.87□□□□□ -1.47
ClpbQ60649 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm33312-201ENSMUST00000222443 332 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ClpbQ60649 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ClpbQ60649 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ClpbQ60649 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ClpbQ60649 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.87□□□□□ -1.47
ClpbQ60649 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ClpbQ60649 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ClpbQ60649 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ClpbQ60649 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.87□□□□□ -1.47
ClpbQ60649 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
ClpbQ60649 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
ClpbQ60649 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm13193-201ENSMUST00000117275 225 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm8692-201ENSMUST00000118102 438 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm22361-201ENSMUST00000158435 176 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm28614-201ENSMUST00000186483 458 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm29519-201ENSMUST00000186994 398 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm44075-201ENSMUST00000204208 216 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm44809-201ENSMUST00000208305 993 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ClpbQ60649 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.86□□□□□ -1.47
ClpbQ60649 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ClpbQ60649 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.86□□□□□ -1.47
ClpbQ60649 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.85□□□□□ -1.47
ClpbQ60649 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ClpbQ60649 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.85□□□□□ -1.47
ClpbQ60649 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.85□□□□□ -1.47
ClpbQ60649 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ClpbQ60649 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ClpbQ60649 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
ClpbQ60649 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.85□□□□□ -1.47
ClpbQ60649 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ClpbQ60649 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms