Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm15660-201ENSMUST00000118997 478 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm12752-201ENSMUST00000121657 811 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm12488-201ENSMUST00000122449 499 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Mir7012-201ENSMUST00000183900 64 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm28503-201ENSMUST00000185966 147 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm37215-201ENSMUST00000194927 1259 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 AC153840.1-201ENSMUST00000219685 313 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm7042-201ENSMUST00000223027 384 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Nsa2-203ENSMUST00000225410 974 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Olfr654-201ENSMUST00000098173 1155 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.19□□□□□ -0.94
Col17a1Q07563 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col17a1Q07563 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col17a1Q07563 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm6061-201ENSMUST00000175860 492 ntBASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Mir7222-201ENSMUST00000183740 75 ntBASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm29160-201ENSMUST00000190094 699 ntBASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Gm44225-201ENSMUST00000203582 186 ntBASIC9.18□□□□□ -0.94
Col17a1Q07563 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col17a1Q07563 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col17a1Q07563 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm14900-201ENSMUST00000120304 733 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm25653-201ENSMUST00000158473 138 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm27541-201ENSMUST00000184078 122 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm28683-201ENSMUST00000187134 615 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm28840-205ENSMUST00000189320 615 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm19029-201ENSMUST00000189923 564 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm28835-203ENSMUST00000190062 615 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm37103-201ENSMUST00000191830 115 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm18944-201ENSMUST00000207672 643 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 AC154436.2-201ENSMUST00000227408 208 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Mir129-1-201ENSMUST00000083535 73 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm13416-201ENSMUST00000117264 1612 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col17a1Q07563 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 Gm11516-201ENSMUST00000118450 1582 ntBASIC9.17□□□□□ -0.94
Col17a1Q07563 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC9.17□□□□□ -0.94
Col17a1Q07563 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col17a1Q07563 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Col17a1Q07563 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms