Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.83□□□□□ -1.48
Col8a1Q00780 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col8a1Q00780 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Mir697-201ENSMUST00000102316 109 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm42606-201ENSMUST00000114209 239 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm15422-201ENSMUST00000117453 541 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm8812-201ENSMUST00000118496 412 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm12710-201ENSMUST00000119011 216 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm13237-201ENSMUST00000122151 635 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm26355-201ENSMUST00000158220 105 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm24002-201ENSMUST00000158456 104 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm20462-201ENSMUST00000172623 408 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm27512-201ENSMUST00000175328 126 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm25244-201ENSMUST00000178089 132 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm25120-201ENSMUST00000180148 79 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm27960-201ENSMUST00000183445 184 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm29263-201ENSMUST00000188718 463 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm18296-201ENSMUST00000192475 783 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm43035-201ENSMUST00000197626 517 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm3511-201ENSMUST00000199823 204 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm18409-202ENSMUST00000220105 529 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 CT030684.2-201ENSMUST00000228946 826 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm24621-201ENSMUST00000082679 140 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm22043-201ENSMUST00000082993 158 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm10205-201ENSMUST00000087431 234 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col8a1Q00780 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col8a1Q00780 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC5.82□□□□□ -1.48
Col8a1Q00780 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm13878-201ENSMUST00000117986 577 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm12392-201ENSMUST00000118014 938 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms