Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
PrkdcP97313 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm10855-201ENSMUST00000100426 2541 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Mir7012-201ENSMUST00000183900 64 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm6719-201ENSMUST00000202067 335 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm37249-201ENSMUST00000195185 2869 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 AC121960.2-201ENSMUST00000227349 3446 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm13770-201ENSMUST00000117149 305 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm12427-201ENSMUST00000117719 302 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm22792-201ENSMUST00000157225 133 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm37097-201ENSMUST00000193676 336 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC3.88□□□□□ -1.79
PrkdcP97313 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.88□□□□□ -1.79
PrkdcP97313 AC118250.1-201ENSMUST00000228569 875 ntBASIC3.88□□□□□ -1.79
PrkdcP97313 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
PrkdcP97313 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PrkdcP97313 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm45073-201ENSMUST00000207688 4247 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm11633-201ENSMUST00000118176 444 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm26153-201ENSMUST00000157433 127 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm5946-201ENSMUST00000182340 970 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm37689-201ENSMUST00000193139 275 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 AC136146.1-201ENSMUST00000196180 91 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm6366-201ENSMUST00000198766 826 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 CT025665.1-201ENSMUST00000215251 1199 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm23875-201ENSMUST00000083711 318 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm22350-201ENSMUST00000083924 156 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 AC155298.1-201ENSMUST00000225350 3250 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PrkdcP97313 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 AC164297.2-201ENSMUST00000224388 1508 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 AC144733.2-201ENSMUST00000222552 2292 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm15905-201ENSMUST00000137042 298 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.87□□□□□ -1.79
PrkdcP97313 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Mir7658-201ENSMUST00000184043 57 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC3.87□□□□□ -1.79
PrkdcP97313 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC3.87□□□□□ -1.79
PrkdcP97313 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 Snord66-201ENSMUST00000104051 75 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm23608-201ENSMUST00000104545 128 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.87□□□□□ -1.79
PrkdcP97313 Gm8214-201ENSMUST00000172123 351 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm37670-201ENSMUST00000193622 229 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms