Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm24411-201ENSMUST00000083428 131 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Gm23097-201ENSMUST00000083448 105 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SgcbP82349 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Mir455-201ENSMUST00000093594 82 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Gm10794-201ENSMUST00000099624 207 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcbP82349 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SgcbP82349 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcbP82349 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcbP82349 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
SgcbP82349 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.39□□□□□ -1.39
SgcbP82349 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcbP82349 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SgcbP82349 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.38□□□□□ -1.39
SgcbP82349 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcbP82349 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Dgkh-204ENSMUST00000227767 3319 ntBASIC6.38□□□□□ -1.39
SgcbP82349 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcbP82349 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm13357-201ENSMUST00000120528 537 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm22478-201ENSMUST00000122570 154 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm24628-201ENSMUST00000122761 289 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm24442-201ENSMUST00000157238 327 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.38□□□□□ -1.39
SgcbP82349 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Mir6341-201ENSMUST00000183490 121 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm27905-201ENSMUST00000184005 207 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Mir6357-201ENSMUST00000184246 104 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm27596-201ENSMUST00000185061 83 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm18501-201ENSMUST00000185363 664 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm28628-201ENSMUST00000187006 264 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm18752-201ENSMUST00000192876 608 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm18900-201ENSMUST00000193218 584 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm18702-201ENSMUST00000196923 588 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm43148-201ENSMUST00000198237 520 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm8539-201ENSMUST00000199822 501 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm19457-201ENSMUST00000200995 448 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.38□□□□□ -1.39
SgcbP82349 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm34424-201ENSMUST00000213400 782 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.38□□□□□ -1.39
SgcbP82349 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcbP82349 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcbP82349 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm23242-201ENSMUST00000083055 107 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Gm6166-201ENSMUST00000098689 409 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.38□□□□□ -1.39
SgcbP82349 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.38□□□□□ -1.39
SgcbP82349 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcbP82349 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms