Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Tpm1P58771 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Tpm1P58771 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Tpm1P58771 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.4□□□□□ -1.39
Tpm1P58771 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.4□□□□□ -1.39
Tpm1P58771 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
Tpm1P58771 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Tpm1P58771 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Tpm1P58771 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm23768-201ENSMUST00000104440 131 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm14842-201ENSMUST00000119577 269 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm15152-201ENSMUST00000121540 394 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm11609-201ENSMUST00000121926 793 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm26162-201ENSMUST00000157793 132 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm23757-201ENSMUST00000158353 100 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm22650-201ENSMUST00000175138 105 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm4832-201ENSMUST00000182679 399 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Mir8114-201ENSMUST00000183582 111 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm38328-201ENSMUST00000195582 317 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm20128-201ENSMUST00000196189 417 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.39□□□□□ -1.39
Tpm1P58771 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm8672-201ENSMUST00000221200 332 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Tpm1P58771 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Tpm1P58771 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Tpm1P58771 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.39□□□□□ -1.39
Tpm1P58771 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Tpm1P58771 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Tpm1P58771 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Tpm1P58771 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm11517-201ENSMUST00000119491 387 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.38□□□□□ -1.39
Tpm1P58771 Mir1960-201ENSMUST00000157488 78 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Gm8550-201ENSMUST00000161621 653 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Gm27004-201ENSMUST00000183300 727 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Gm29496-201ENSMUST00000189854 693 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm7804-202ENSMUST00000194187 854 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm18205-201ENSMUST00000209215 841 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm18226-201ENSMUST00000215261 521 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Tpm1P58771 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Tpm1P58771 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Tpm1P58771 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Tpm1P58771 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Tpm1P58771 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.38□□□□□ -1.39
Tpm1P58771 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms