Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm11990-201ENSMUST00000121505 897 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.3□□□□□ -1.56
Rfx3P48381 Snora47-201ENSMUST00000157483 138 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm28586-201ENSMUST00000189857 456 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm37784-201ENSMUST00000193233 189 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm37358-201ENSMUST00000195492 479 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Gm44538-201ENSMUST00000205615 348 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.3□□□□□ -1.56
Rfx3P48381 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.3□□□□□ -1.56
Rfx3P48381 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Rfx3P48381 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Rfx3P48381 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm25795-201ENSMUST00000104421 132 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm13702-201ENSMUST00000118542 825 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm12307-201ENSMUST00000120581 590 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm8183-201ENSMUST00000183134 980 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm27998-201ENSMUST00000184902 361 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm28080-201ENSMUST00000188552 722 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm21524-201ENSMUST00000190499 696 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm21715-201ENSMUST00000191056 694 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm37809-201ENSMUST00000195050 931 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm44316-201ENSMUST00000199274 97 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm43084-201ENSMUST00000200696 947 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm2602-201ENSMUST00000202112 571 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm7570-201ENSMUST00000215246 698 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm18405-201ENSMUST00000220743 511 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Rfx3P48381 Gm23624-201ENSMUST00000082463 321 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.29□□□□□ -1.56
Rfx3P48381 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.29□□□□□ -1.56
Rfx3P48381 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx3P48381 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Rfx3P48381 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Rfx3P48381 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.28□□□□□ -1.56
Rfx3P48381 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.28□□□□□ -1.56
Rfx3P48381 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Rfx3P48381 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rfx3P48381 Gm9005-201ENSMUST00000119908 607 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rfx3P48381 Gm13998-201ENSMUST00000120952 335 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Gm12322-201ENSMUST00000121605 389 ntBASIC5.28□□□□□ -1.56
Rfx3P48381 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Rfx3P48381 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.28□□□□□ -1.56
Rfx3P48381 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms