Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm18325-201ENSMUST00000203228 835 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx2P43241 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx2P43241 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Cdx2P43241 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Mir134-201ENSMUST00000083492 71 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx2P43241 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.67□□□□□ -1.5
Cdx2P43241 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.67□□□□□ -1.5
Cdx2P43241 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx2P43241 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx2P43241 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Lipe-203ENSMUST00000105177 1251 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm13579-201ENSMUST00000118519 517 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx2P43241 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm8321-201ENSMUST00000181691 980 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm29454-201ENSMUST00000190805 393 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm42522-201ENSMUST00000196071 255 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm43516-201ENSMUST00000196891 322 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm7733-201ENSMUST00000199038 919 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm45249-201ENSMUST00000211021 348 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx2P43241 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm5087-204ENSMUST00000225820 645 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx2P43241 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx2P43241 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.66□□□□□ -1.5
Cdx2P43241 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx2P43241 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx2P43241 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx2P43241 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.65□□□□□ -1.5
Cdx2P43241 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx2P43241 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.65□□□□□ -1.5
Cdx2P43241 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.65□□□□□ -1.5
Cdx2P43241 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.65□□□□□ -1.5
Cdx2P43241 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx2P43241 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx2P43241 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.65□□□□□ -1.5
Cdx2P43241 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms