Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm8761-201ENSMUST00000121507 955 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm23030-201ENSMUST00000158004 273 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm37203-201ENSMUST00000191618 385 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm43116-201ENSMUST00000199789 195 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm5027-201ENSMUST00000206700 375 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.98□□□□□ -1.29
Traf1P39428 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.98□□□□□ -1.29
Traf1P39428 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.98□□□□□ -1.29
Traf1P39428 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Traf1P39428 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Traf1P39428 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Traf1P39428 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.98□□□□□ -1.29
Traf1P39428 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Traf1P39428 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Traf1P39428 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm11925-201ENSMUST00000121375 535 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm27854-201ENSMUST00000175578 244 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Gm27004-201ENSMUST00000183300 727 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Gm8367-201ENSMUST00000186145 887 ntBASIC6.97□□□□□ -1.29
Traf1P39428 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Gm44243-201ENSMUST00000204323 692 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.97□□□□□ -1.29
Traf1P39428 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Traf1P39428 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm23502-201ENSMUST00000083902 145 ntBASIC6.97□□□□□ -1.29
Traf1P39428 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.97□□□□□ -1.29
Traf1P39428 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.97□□□□□ -1.29
Traf1P39428 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Traf1P39428 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Traf1P39428 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.96□□□□□ -1.29
Traf1P39428 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Traf1P39428 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.96□□□□□ -1.29
Traf1P39428 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.96□□□□□ -1.29
Traf1P39428 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Traf1P39428 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Traf1P39428 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Traf1P39428 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms